Tools for BioInformatics
Types of Tools
Production Sequencing Software
Example: Sanger Centre, Shotgun Sequencing of typical human clone
Databases
Species-specific Databases
Annotation Tools
Database Software
Gene Prediction
GRAIL
GeneMark
Sequence Alignment
Pairwise Alignments
Multiple Sequence Alignments
Similarity Searching
BLAST variations
Protein Structure Prediction
Protein Secondary Structure Prediction
Protein Function Prediction
Pfam components
Phylogeny Reconstruction
Visualization Tools
Physical Mapping Software
Good Resources
Email: eileen@cs.uga.edu
Home Page: www.cs.uga.edu/~eileen
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